August 19th, 2024

Largest protein yet discovered builds algal toxins

Scientists at UC San Diego discovered the largest protein, PKZILLA-1, which may enhance monitoring of harmful algal blooms and inform the development of new medicines and materials.

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Largest protein yet discovered builds algal toxins

Scientists at UC San Diego's Scripps Institution of Oceanography have identified the largest protein known to date, named PKZILLA-1, while studying the toxin production of the marine alga Prymnesium parvum. This protein is approximately 25% larger than titin, the previous record holder found in human muscles. The discovery of PKZILLA-1, which has a mass of 4.7 megadaltons, and another large protein, PKZILLA-2, is significant as they are essential for synthesizing prymnesin, a complex toxin responsible for massive fish kills. The research also revealed unusually large genes that encode these proteins, which could enhance monitoring of harmful algal blooms by detecting the genes instead of the toxins. This method may allow for earlier detection of blooms, improving environmental management. The findings could also inform the development of new medicines and materials by providing insights into the natural assembly of complex chemicals. The study highlights the potential for using knowledge of natural processes to create innovative products, such as anti-cancer drugs or new materials. The researchers aim to apply their genetic screening techniques to other species that produce similar toxins, potentially broadening the scope of monitoring and understanding harmful algal blooms globally.

- Researchers discovered the largest protein, PKZILLA-1, while studying algal toxins.

- PKZILLA-1 is 25% larger than the previous record holder, titin.

- The discovery could improve monitoring of harmful algal blooms by detecting genes instead of toxins.

- Insights from this research may lead to new medicines and materials.

- The team plans to apply their techniques to other species producing similar toxins.

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By @UniverseHacker - 8 months
These type of proteins "PKSs" are one of the most promising and exciting areas of biotech research. They offer a path to make a sort of programmable biochemical factory, where bacteria can make a custom drug, plastic polymer, etc. in a predictable way. They can also do some tricky chemistry that is almost impossible any other way.

PKSs build a molecule piece by piece like a car assembly line, and follow a predictable logic where you can tell from the parts in the DNA exactly what chemical they will make. After 30+ years of working on it bioengineers are finally figuring out how to reliably mix and match the parts to make custom PKSs that work.

By @biofox - 8 months
The impressive thing about this is not the size -- making long peptide chains is easy -- it's the fact that this can be consistently folded into a useful structure, without misfolding or aggregating.

I have to wonder how much of the structure is functional, versus, for lack of a better term, structural "bulk" that is unaffected by misfolding.

By @kylehotchkiss - 8 months
How much computing power would it take to design and fold this protein the same way? And how much longer until we have software which can do that? It'd be really cool to see what sort of super proteins we could design, all the "bugs" that would need to be updated with updated versions, and what we build on a larger scale with them. This thing looks massive enough it could just eat a small microorganism.